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  5. Pnu_g11641

Pnu_g11641


Description : ubiquitin adaptor protein *(TOL) & original description: none


Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g11641
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT1G76970 No alias Target of Myb protein 1 0.03 OrthoFinder output from all 47 species
Aop_g01215 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030233001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
Mp1g23050.1 No alias TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Pnu_g06559 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
MF GO:0043130 ubiquitin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009116 nucleoside metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004152 GAT_dom 234 307
IPR002014 VHS_dom 41 173
No external refs found!