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Gb_20187


Description : Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana (sp|q9lfl5|pp390_arath : 511.0)


Gene families : OG_01_0020664 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0022187 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0021607 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20187
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
MA_135424g0010 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.07 Archaeplastida
MA_135424g0010 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.06 LandPlants
MA_135424g0010 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.07 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 642 701
IPR002885 Pentatricopeptide_repeat 52 96
IPR002885 Pentatricopeptide_repeat 544 567
IPR002885 Pentatricopeptide_repeat 469 516
IPR002885 Pentatricopeptide_repeat 232 270
IPR002885 Pentatricopeptide_repeat 367 415
IPR002885 Pentatricopeptide_repeat 131 178
No external refs found!