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  5. Als_g11704

Als_g11704 (ATCYCD2;1, CYCD2;1)


Aliases : ATCYCD2;1, CYCD2;1

Description : regulatory protein *(CYCD) of cell cycle & original description: none


Gene families : OG0000395 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g11704

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00148150 CYCD1;1,... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 OrthoFinder output from all 47 species
AMTR_s00072p00074880 CYCD6;1,... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 OrthoFinder output from all 47 species
AMTR_s00164p00026810 ATCYCD2;1,... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 OrthoFinder output from all 47 species
AMTR_s00190p00017930 ATCYCD2;1,... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.07 OrthoFinder output from all 47 species
AT1G70210 CYCD1;1, ATCYCD1;1 CYCLIN D1;1 0.03 OrthoFinder output from all 47 species
AT4G34160 CYCD3, CYCD3;1 CYCLIN D3;1 0.04 OrthoFinder output from all 47 species
AT5G67260 CYCD3;2 CYCLIN D3;2 0.03 OrthoFinder output from all 47 species
Adi_g006708 CYCD4;2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034336 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aev_g09917 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aev_g20141 CYCD1;1, ATCYCD1;1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15264 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ala_g22032 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aop_g03463 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aop_g12696 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Aop_g18668 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aop_g31334 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Aop_g35995 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aop_g68494 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22554.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene39255.t1 ATCYCD2;1,... regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene51365.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54821.t1 CYCD3, CYCD3;1,... regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene60777.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene70970.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Cba_g03303 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Cba_g16891 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Cba_g16892 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Ceric.09G017400.1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.10G062700.1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ceric.14G055100.1 CYCD3;3, Ceric.14G055100 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ceric.1Z120100.1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Ceric.31G027000.1 CYCD3;3, Ceric.31G027000 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.35G003500.1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Dac_g00746 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Dac_g11389 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Dac_g16428 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dcu_g03868 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Dcu_g07032 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Dde_g01468 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ehy_g05487 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07454 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01000125001 CYCD5;1 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 OrthoFinder output from all 47 species
GSVIVT01000451001 CYCD6;1 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 OrthoFinder output from all 47 species
GSVIVT01003175001 CYCD3;3 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 OrthoFinder output from all 47 species
GSVIVT01009432001 CYCD3;3 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 OrthoFinder output from all 47 species
GSVIVT01037810001 CYCD1;1, ATCYCD1;1 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 OrthoFinder output from all 47 species
LOC_Os03g42070.1 CYCD5;1, LOC_Os03g42070 cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
LOC_Os07g37010.1 CYCD6;1, LOC_Os07g37010 cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
LOC_Os12g39830.1 CYCD5;1, LOC_Os12g39830 cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
Len_g00488 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Len_g12697 ATCYCD2;1, CYCD2;1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20357 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Len_g55932 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Lfl_g10565 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Lfl_g13622 ATCYCD2;1, CYCD2;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
MA_114375g0010 CYCD1;1, ATCYCD1;1 cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
MA_172842g0010 CYCD3;3 cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
MA_173888g0010 CYCD3, CYCD3;1 cyclin (CYCD) 0.01 OrthoFinder output from all 47 species
MA_182921g0010 CYCD3, CYCD3;1 cyclin (CYCD) 0.01 OrthoFinder output from all 47 species
MA_93221g0010 CYCD1;1, ATCYCD1;1 cyclin (CYCD) 0.04 OrthoFinder output from all 47 species
Mp8g17230.1 ATCYCD2;1, CYCD2;1 cyclin (CYCD) 0.04 OrthoFinder output from all 47 species
Msp_g06191 CYCD3;2 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Msp_g08856 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Msp_g10139 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Nbi_g01101 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Nbi_g03493 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Nbi_g43541 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Pnu_g29651 ATCYCD2;1, CYCD2;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ppi_g04462 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ppi_g06303 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ppi_g10385 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014749 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020437 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0134.g022297 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023971 No alias regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sam_g06392 No alias regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Sam_g14687 No alias regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Sam_g16646 No alias regulatory protein *(CYCD) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Smo15078 CYCD3;3 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 OrthoFinder output from all 47 species
Smo412774 CYCD1;1, ATCYCD1;1 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 OrthoFinder output from all 47 species
Solyc05g006050.3.1 CYCD1;1,... cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
Solyc07g054950.2.1 CYCD6;1, Solyc07g054950 cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
Spa_g04266 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Spa_g04498 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Spa_g11128 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Spa_g15040 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Spa_g15041 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Spa_g38227 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Spa_g45652 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Spa_g47878 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Tin_g00808 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Tin_g03949 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Tin_g06567 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Tin_g09055 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Tin_g10765 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Zm00001e009441_P003 CYCD3, CYCD3;1,... cyclin (CYCD) 0.04 OrthoFinder output from all 47 species
Zm00001e009982_P002 CYCD4;2, Zm00001e009982 cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
Zm00001e018000_P001 CYCD1;1,... cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
Zm00001e033498_P001 CYCD3;3, Zm00001e033498 cyclin (CYCD) 0.04 OrthoFinder output from all 47 species
Zm00001e034029_P002 CYCD1;1,... cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
Zm00001e034405_P005 ATCYCD2;1,... cyclin (CYCD) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 64 191
IPR004367 Cyclin_C-dom 193 269
No external refs found!