Als_g11206 (RAP2.2)

Aliases : RAP2.2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g11206

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00148p00084540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AT4G31060	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT5G18450	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT5G61600	ERF104	ethylene response factor 104	0.03	OrthoFinder output from all 47 species
Als_g37615	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g07767	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Aspi01Gene23221.t1	Aspi01Gene23221	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0070.g036708	No alias	not classified & original description: CDS=1-939	0.04	OrthoFinder output from all 47 species
Cre06.g275500	RAP2.2	No description available	0.01	OrthoFinder output from all 47 species
Cre16.g649433	RAP2.2	No description available	0.01	OrthoFinder output from all 47 species
Dcu_g04654	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF19/20) &...	0.02	OrthoFinder output from all 47 species
Dcu_g19848	RAP2.6	subgroup ERF-X transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g45973	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Ehy_g27365	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
GSVIVT01017572001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	OrthoFinder output from all 47 species
GSVIVT01033416001	RAP2.11	External stimuli response.biotic...	0.01	OrthoFinder output from all 47 species
LOC_Os01g21120.1	HRE2, LOC_Os01g21120	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g08500.2	RAP2.2, LOC_Os03g08500	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os03g64260.1	ERF1, ATERF1,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
LOC_Os04g34970.1	ERF110, LOC_Os04g34970	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
LOC_Os04g46220.1	ERF-1, ATERF-1,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Lfl_g25640	No alias	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Lfl_g30898	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.01	OrthoFinder output from all 47 species
Mp1g20040.1	ATERF4, RAP2.5,...	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Nbi_g11442	No alias	subgroup ERF-V transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Pnu_g12819	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Pnu_g15298	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002282	No alias	subgroup ERF-VI transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sam_g16459	No alias	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g065980.4.1	ERF72, EBP,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc02g067020.1.1	RAP2.11, Solyc02g067020	transcription factor (ERF). transcription factor (ERN1)	0.01	OrthoFinder output from all 47 species
Solyc05g052040.1.1	Solyc05g052040	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc12g049560.2.1	RAP2.2, Solyc12g049560	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Spa_g02616	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Spa_g10938	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e019567_P001	ATERF4, RAP2.5,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e021579_P001	ERF7, ATERF7,...	Pathogenesis-related genes transcriptional activator...	0.02	OrthoFinder output from all 47 species
Zm00001e027351_P001	ATERF4, RAP2.5,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e028920_P001	ATERF4, RAP2.5,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e032032_P001	ATERF12, ERF12,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e032033_P001	ATERF-9, ERF9,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003725	double-stranded RNA binding	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0008373	sialyltransferase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	99	148

External Links

No external refs found!

Als_g11206 (RAP2.2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation