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  5. Pnu_g11392

Pnu_g11392


Description : not classified & original description: none


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g11392
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Adi_g056214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g08265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16058 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 209 258
IPR002885 Pentatricopeptide_repeat 349 398
IPR002885 Pentatricopeptide_repeat 142 187
IPR002885 Pentatricopeptide_repeat 279 328
IPR002885 Pentatricopeptide_repeat 558 607
IPR033443 PPR_long 435 553
No external refs found!