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  5. Als_g10476

Als_g10476 (ACT7)


Aliases : ACT7

Description : actin filament protein & original description: none


Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g10476
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00184900 ACT7,... Cytoskeleton.microfilament network.actin filament protein 0.02 OrthoFinder output from all 47 species
AT5G09810 ACT7 actin 7 0.03 OrthoFinder output from all 47 species
Adi_g104501 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12310 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10645 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10646 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06954 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02831 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13847 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37499 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g60033 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G073000.1 ACT7, Ceric.11G073000 actin filament protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.36G029400.1 ACT7, Ceric.36G029400 actin filament protein & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020904.106 DER1, LSR2, ACT2, ENL2 Actin-2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g08477 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10817 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05245 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09456 AAc1, ACT1 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19069 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21653 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003099001 ACT7 Actin-1 OS=Oryza sativa subsp. indica 0.03 OrthoFinder output from all 47 species
GSVIVT01026580001 ACT7 Cytoskeleton.microfilament network.actin filament protein 0.05 OrthoFinder output from all 47 species
Gb_22033 ACT7 actin filament protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g61970.1 ACT7, LOC_Os03g61970 actin filament protein 0.03 OrthoFinder output from all 47 species
LOC_Os10g36650.1 ACT7, LOC_Os10g36650 actin filament protein 0.03 OrthoFinder output from all 47 species
LOC_Os12g44350.1 ACT11, LOC_Os12g44350 actin filament protein 0.02 OrthoFinder output from all 47 species
Len_g12214 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18847 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28710 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48472 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50894 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18991 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22569 ACT7 actin filament protein & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g23151 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
MA_2133139g0010 AAc1, ACT1 Actin-75 OS=Solanum tuberosum (sp|p30169|act7_soltu : 149.0) 0.02 OrthoFinder output from all 47 species
Msp_g20173 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39943 ACT7 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g04666 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07984 ACT7 actin filament protein & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g14230 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02785 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02799 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08922 ACT11 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24334 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c12_24710V3.1 ACT7, Pp3c12_24710 actin 7 0.01 OrthoFinder output from all 47 species
Ppi_g12549 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019853 ACT7 actin filament protein & original description: CDS=251-1381 0.03 OrthoFinder output from all 47 species
Sam_g20101 No alias actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g078400.3.1 ACT7, Solyc03g078400 actin filament protein 0.03 OrthoFinder output from all 47 species
Solyc10g086460.2.1 ACT4, Solyc10g086460 actin filament protein 0.03 OrthoFinder output from all 47 species
Solyc11g005330.2.1 ACT7, Solyc11g005330 actin filament protein 0.03 OrthoFinder output from all 47 species
Spa_g02411 AAc1, ACT1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17579 ACT7 actin filament protein & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22103 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23478 ACT7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54125 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07299 ACT7 acTin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11974 ACT7 acTin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024651_P001 ACT7, Zm00001e024651 actin filament protein 0.01 OrthoFinder output from all 47 species
Zm00001e029682_P001 ACT7, Zm00001e029682 actin filament protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034227 tRNA thio-modification IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!