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  5. Als_g10416

Als_g10416


Description : not classified & original description: none


Gene families : OG0004023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g10416
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Adi_g017907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48572.t1 CRM3, HCF152,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g57127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G037000.1 Ceric.12G037000 not classified & original description: pacid=50600637... 0.03 OrthoFinder output from all 47 species
Ceric.23G078700.1 Ceric.23G078700 not classified & original description: pacid=50610433... 0.04 OrthoFinder output from all 47 species
Dac_g23808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23419 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g46900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08780 CRM3, HCF152 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g21700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01185 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15086 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49332 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 391 446
IPR002885 Pentatricopeptide_repeat 155 197
IPR002885 Pentatricopeptide_repeat 333 378
IPR002885 Pentatricopeptide_repeat 246 292
No external refs found!