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  5. Als_g10327

Als_g10327


Description : not classified & original description: none


Gene families : OG0001478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g10327
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00160040 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G58370 ATXYN1, RXF12 glycosyl hydrolase family 10 protein /... 0.05 OrthoFinder output from all 47 species
AT4G08160 No alias glycosyl hydrolase family 10 protein /... 0.06 OrthoFinder output from all 47 species
AT4G33820 No alias Glycosyl hydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g007681 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g086595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25978 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g25716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0207.g057923 No alias not classified & original description: CDS=1-1875 0.04 OrthoFinder output from all 47 species
Ceric.30G035800.1 Ceric.30G035800 not classified & original description: pacid=50607993... 0.03 OrthoFinder output from all 47 species
Ceric.30G036100.1 Ceric.30G036100 not classified & original description: pacid=50608372... 0.03 OrthoFinder output from all 47 species
Dcu_g11065 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01037825001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01037832001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01037833001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_02219 No alias no description available(sp|q84wt5|xyn5l_arath : 355.0) 0.03 OrthoFinder output from all 47 species
LOC_Os01g04290.1 LOC_Os01g04290 endo-beta-1,4-xylanase 0.06 OrthoFinder output from all 47 species
LOC_Os01g04300.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.09 OrthoFinder output from all 47 species
LOC_Os03g10440.1 LOC_Os03g10440 no description available(sp|a0a1p8b8f8|xyn5_arath : 380.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g10469.1 LOC_Os03g10469 no description available(sp|q680b7|xyn4_arath : 358.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g14010.1 LOC_Os03g14010 no description available(sp|q84wt5|xyn5l_arath : 305.0) 0.03 OrthoFinder output from all 47 species
LOC_Os10g21110.1 LOC_Os10g21110 no description available(sp|q680b7|xyn4_arath : 358.0) 0.05 OrthoFinder output from all 47 species
Len_g07345 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp6g05510.1 ATXYN1, RXF12 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
Msp_g31883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g09327 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo420481 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc05g051260.3.1 Solyc05g051260 no description available(sp|q84wt5|xyn5l_arath : 344.0) 0.02 OrthoFinder output from all 47 species
Solyc10g055370.2.1 Solyc10g055370 no description available(sp|a0a1p8b8f8|xyn5_arath : 301.0) 0.02 OrthoFinder output from all 47 species
Tin_g27477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000757_P001 Zm00001e000757 no description available(sp|q84wt5|xyn5l_arath : 397.0) 0.03 OrthoFinder output from all 47 species
Zm00001e002760_P001 Zm00001e002760 no description available(sp|q680b7|xyn4_arath : 360.0) 0.03 OrthoFinder output from all 47 species
Zm00001e016992_P001 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.07 OrthoFinder output from all 47 species
Zm00001e038773_P006 Zm00001e038773 no description available(sp|q84wt5|xyn5l_arath : 388.0) 0.03 OrthoFinder output from all 47 species
Zm00001e040632_P001 Zm00001e040632 no description available(sp|q680b7|xyn4_arath : 318.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR003305 CenC_carb-bd 51 180
IPR001000 GH10_dom 245 505
No external refs found!