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  5. Als_g09927

Als_g09927 (CID12, ATRBP37, RBP37)


Aliases : CID12, ATRBP37, RBP37

Description : not classified & original description: none


Gene families : OG0000804 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000804_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g09927

Target Alias Description ECC score Gene Family Method Actions
AT1G32790 CID11 CTC-interacting domain 11 0.04 OrthoFinder output from all 47 species
AT3G49390 CID10 CTC-interacting domain 10 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010001 CID12, ATRBP37, RBP37 not classified & original description: CDS=423-1628 0.03 OrthoFinder output from all 47 species
Cre10.g439700 CID8 Polyadenylate-binding protein-interacting protein 11... 0.02 OrthoFinder output from all 47 species
LOC_Os08g02330.1 CID12, ATRBP37,... Polyadenylate-binding protein-interacting protein 11... 0.03 OrthoFinder output from all 47 species
MA_15380g0010 CID12, ATRBP37, RBP37 Polyadenylate-binding protein-interacting protein 12... 0.03 OrthoFinder output from all 47 species
Msp_g06993 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21523 CID12, ATRBP37, RBP37 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 276 343
IPR000504 RRM_dom 179 241
IPR009818 Ataxin-2_C 112 126
No external refs found!