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  5. Als_g09536

Als_g09536


Description : not classified & original description: none


Gene families : OG0002514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g09536
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00017760 RLP51, AtRLP51,... Receptor-like protein 51 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g49306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G022000.1 Ceric.04G022000 not classified & original description: pacid=50631203... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004810 RLP55, AtRLP55 not classified & original description: CDS=1-1794 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 304 324
IPR001611 Leu-rich_rpt 278 292
IPR001611 Leu-rich_rpt 327 386
No external refs found!