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  5. Als_g08438

Als_g08438 (ARFA1E, ATARFA1E)


Aliases : ARFA1E, ATARFA1E

Description : not classified & original description: none


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08438

Target Alias Description ECC score Gene Family Method Actions
AT2G47170 ARF1A1C Ras-related small GTP-binding family protein 0.03 OrthoFinder output from all 47 species
Cba_g31560 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G015600.1 ATARFA1B,... ARF-GTPase *(ARF1) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g40902 ATARFA1F, ARFA1F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07364 ARF1A1C ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26837 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.06 OrthoFinder output from all 47 species
Gb_07323 ARFA1E, ATARFA1E ARF-GTPase 0.02 OrthoFinder output from all 47 species
LOC_Os01g16030.1 ATARFA1B,... ARF-GTPase 0.02 OrthoFinder output from all 47 species
Lfl_g23069 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33269 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g14560.1 ATARFA1F, ARFA1F ARF-GTPase 0.02 OrthoFinder output from all 47 species
Msp_g20906 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40990 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c10_20740V3.1 ARFA1E,... ADP-ribosylation factor A1E 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020267 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: CDS=156-554 0.04 OrthoFinder output from all 47 species
Spa_g29323 ATARFA1F, ARFA1F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49718 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 117 287
No external refs found!