1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g08342

Als_g08342


Description : not classified & original description: none


Gene families : OG0008649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008649_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08342
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene18686.t2 Aspi01Gene18686 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ceric.20G003800.1 Ceric.20G003800 not classified & original description: pacid=50566518... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021181.9 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g25891 No alias not classified & original description: none 0.22 OrthoFinder output from all 47 species
GSVIVT01033557001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os05g31254.1 LOC_Os05g31254 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g10010.1 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Nbi_g04369 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Smo403849 No alias No description available 0.03 OrthoFinder output from all 47 species
Tin_g06614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031543_P001 Zm00001e031543 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001357 BRCT_dom 544 602
No external refs found!