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  5. Als_g08306

Als_g08306


Description : component *(uL15) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001601_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08306

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00058120 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT1G23290 RPL27AB, RPL27A Ribosomal protein L18e/L15 superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G70600 No alias Ribosomal protein L18e/L15 superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g19375 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0167.g054511 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cre02.g115200 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g01203 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dde_g03669 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
LOC_Os07g42170.1 RPL27AB, RPL27A,... component RPL27a of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_10436259g0020 No alias component RPL27a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp1g15440.1 No alias component RPL27a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Msp_g01324 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c16_22430V3.1 Pp3c16_22430 Ribosomal protein L18e/L15 superfamily protein 0.03 OrthoFinder output from all 47 species
Pp3c25_13260V3.1 Pp3c25_13260 Ribosomal protein L18e/L15 superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c6_3470V3.1 Pp3c6_3470 Ribosomal protein L18e/L15 superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c8_5770V3.1 Pp3c8_5770 Ribosomal protein L18e/L15 superfamily protein 0.02 OrthoFinder output from all 47 species
Sam_g25032 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g25695 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g47290 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g48454 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Solyc03g112360.1.1 Solyc03g112360 component RPL27a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Solyc06g071720.1.1 Solyc06g071720 component RPL27a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Spa_g17344 RPL27AB, RPL27A component *(uL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e010753_P001 Zm00001e010753 component RPL27a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e035537_P001 Zm00001e035537 component RPL27a of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 28 141
No external refs found!