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  5. Als_g08248

Als_g08248


Description : light chain of clathrin triskelion & original description: none


Gene families : OG0002188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08248
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Adi_g077024 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10177 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45363 No alias light chain of clathrin triskelion & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09281 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032845001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
LOC_Os06g51510.1 LOC_Os06g51510 light chain of clathrin triskelion 0.03 OrthoFinder output from all 47 species
Lfl_g05463 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g03080.1 No alias light chain of clathrin triskelion 0.03 OrthoFinder output from all 47 species
Pp3c11_15000V3.1 Pp3c11_15000 Clathrin light chain protein 0.01 OrthoFinder output from all 47 species
Pp3c7_10150V3.1 Pp3c7_10150 Clathrin light chain protein 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007566 No alias light chain of clathrin triskelion & original... 0.02 OrthoFinder output from all 47 species
Solyc02g078540.4.1 Solyc02g078540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc07g054180.4.1 Solyc07g054180 light chain of clathrin triskelion 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEA Interproscan
CC GO:0030132 clathrin coat of coated pit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
InterPro domains Description Start Stop
IPR000996 Clathrin_L-chain 186 324
No external refs found!