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  5. Als_g08158

Als_g08158


Description : not classified & original description: none


Gene families : OG0005532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005532_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08158
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00185250 evm_27.TU.AmTr_v1... BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G45540 No alias WD-40 repeat family protein / beige-related 0.06 OrthoFinder output from all 47 species
Adi_g107386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02732 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g23718 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29586.t1 Aspi01Gene29586 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29588.t1 Aspi01Gene29588 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g27233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z002100.1 Ceric.1Z002100 not classified & original description: pacid=50637203... 0.02 OrthoFinder output from all 47 species
Dcu_g11295 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g50882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027547001 No alias BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_14861 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os04g46892.1 LOC_Os04g46892 BEACH domain-containing protein C2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os04g46894.1 LOC_Os04g46894 BEACH domain-containing protein C2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g29845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_16421g0010 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp6g16270.1 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g13656 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08434 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g16690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08777 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo60006 No alias BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g094050.1.1 Solyc01g094050 BEACH domain-containing protein C2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc01g094060.4.1 Solyc01g094060 BEACH domain-containing protein C2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e007294_P001 Zm00001e007294 BEACH domain-containing protein C2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e015356_P001 Zm00001e015356 BEACH domain-containing protein C2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR031570 NBEA/BDCP_DUF4704 917 1231
IPR031570 NBEA/BDCP_DUF4704 1414 1559
IPR001680 WD40_repeat 2967 3001
IPR023362 PH-BEACH_dom 2412 2511
IPR000409 BEACH_dom 2539 2815
No external refs found!