Als_g07808 (ATCNGC20, CNGC20, CNBT1)

Aliases : ATCNGC20, CNGC20, CNBT1

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none

Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g07808

Target	Alias	Description	ECC score	Gene Family Method
Aop_g65016	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
LOC_Os06g08850.1	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
LOC_Os09g38580.1	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
MA_10437079g0010	CNGC5, ATCNGC5	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Solyc02g086990.4.1	CNGC18,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
Zm00001e034885_P002	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
Zm00001e036286_P001	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0070001	aspartic-type peptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	184	507

External Links

No external refs found!