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  5. Als_g07759

Als_g07759 (VPS45, ATVPS45)


Aliases : VPS45, ATVPS45

Description : regulatory protein *(VPS45) of vesicle trafficking & original description: none


Gene families : OG0005423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005423_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g07759
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
Cba_g02007 VPS45, ATVPS45 regulatory protein *(VPS45) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Ceric.01G112400.1 VPS45, ATVPS45,... regulatory protein *(VPS45) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.111 VPS45, ATVPS45 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
LOC_Os02g24134.1 VPS45, ATVPS45,... VPS45 vesicle trafficking regulator protein 0.04 OrthoFinder output from all 47 species
Len_g15652 VPS45, ATVPS45 regulatory protein *(VPS45) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Lfl_g40153 VPS45, ATVPS45 regulatory protein *(VPS45) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Solyc04g064820.3.1 VPS45, ATVPS45,... VPS45 vesicle trafficking regulator protein 0.03 OrthoFinder output from all 47 species
Tin_g39051 VPS45, ATVPS45 regulatory protein *(VPS45) of vesicle trafficking &... 0.04 OrthoFinder output from all 47 species
Zm00001e021705_P002 VPS45, ATVPS45,... VPS45 vesicle trafficking regulator protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001619 Sec1-like 22 550
No external refs found!