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  5. Als_g07726

Als_g07726


Description : splicing factor *(SR45a) & original description: none


Gene families : OG0001089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g07726

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0265.g060940 No alias splicing factor *(SR45a) & original description: CDS=1-867 0.03 OrthoFinder output from all 47 species
Cba_g12459 No alias splicing factor *(SR45a) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24697 No alias splicing factor *(SR45a) & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.18G028600.1 Ceric.18G028600 splicing factor *(SR45a) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.36G057600.1 Ceric.36G057600 splicing factor *(SR45a) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G063000.1 Ceric.38G063000 splicing factor *(SR45a) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.146 No alias Serine/arginine-rich splicing factor SR45a... 0.01 OrthoFinder output from all 47 species
Dac_g32618 No alias splicing factor *(SR45a) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g51784 No alias splicing factor *(SR45a) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28535 No alias splicing factor *(SR45a) & original description: none 0.03 OrthoFinder output from all 47 species
MA_89416g0010 No alias Serine/arginine-rich splicing factor SR45a... 0.02 OrthoFinder output from all 47 species
Nbi_g11813 No alias splicing factor *(SR45a) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0358.g027298 No alias splicing factor *(SR45a) & original description: CDS=1-846 0.03 OrthoFinder output from all 47 species
Spa_g06335 No alias splicing factor *(SR45a) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27155 No alias splicing factor *(SR45a) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013302_P002 Zm00001e013302 Serine/arginine-rich splicing factor SR45a... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 49 118
No external refs found!