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  5. Als_g07706

Als_g07706


Description : component *(uS11) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001893 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001893_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g07706

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00104960 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
AT2G36160 No alias Ribosomal protein S11 family protein 0.04 OrthoFinder output from all 47 species
AT3G11510 No alias Ribosomal protein S11 family protein 0.04 OrthoFinder output from all 47 species
AT3G52580 No alias Ribosomal protein S11 family protein 0.04 OrthoFinder output from all 47 species
Ceric.01G067700.1 Ceric.01G067700 component *(uS11) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cre11.g480150 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g11136 No alias component *(uS11) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dde_g26059 No alias component *(uS11) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01021436001 ATTRANS11, TRANS11 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os02g33140.1 LOC_Os02g33140 component RPS14 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp8g03250.1 No alias component RPS14 of SSU proteome 0.03 OrthoFinder output from all 47 species
Pp3c15_22240V3.1 Pp3c15_22240 Ribosomal protein S11 family protein 0.01 OrthoFinder output from all 47 species
Pp3c9_21480V3.1 Pp3c9_21480 Ribosomal protein S11 family protein 0.02 OrthoFinder output from all 47 species
Sam_g35851 No alias component *(uS11) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Solyc09g010100.3.1 Solyc09g010100 component RPS14 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc10g083280.4.1 Solyc10g083280 component RPS14 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g11705 No alias component *(uS11) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001971 Ribosomal_S11 30 148
No external refs found!