Als_g07705

Description : component *(uS11) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0001893 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001893_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g07705

Target	Alias	Description	ECC score	Gene Family Method
AT2G36160	No alias	Ribosomal protein S11 family protein	0.03	OrthoFinder output from all 47 species
AT3G11510	No alias	Ribosomal protein S11 family protein	0.04	OrthoFinder output from all 47 species
AT3G52580	No alias	Ribosomal protein S11 family protein	0.03	OrthoFinder output from all 47 species
Azfi_s0228.g059059	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0339.g065604	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001154.44	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.03	OrthoFinder output from all 47 species
Cre11.g480150	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
Dac_g08660	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g06656	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g11136	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Dde_g26059	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01021436001	ATTRANS11, TRANS11	Protein biosynthesis.cytosolic ribosome.small subunit...	0.03	OrthoFinder output from all 47 species
LOC_Os02g33140.1	LOC_Os02g33140	component RPS14 of SSU proteome	0.03	OrthoFinder output from all 47 species
Mp8g03250.1	No alias	component RPS14 of SSU proteome	0.03	OrthoFinder output from all 47 species
Mp8g10900.1	No alias	component RPS14 of SSU proteome	0.02	OrthoFinder output from all 47 species
Msp_g19753	No alias	component *(uS11) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Pp3c9_21480V3.1	Pp3c9_21480	Ribosomal protein S11 family protein	0.03	OrthoFinder output from all 47 species
Smo183051	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
Solyc10g083280.4.1	Solyc10g083280	component RPS14 of SSU proteome	0.04	OrthoFinder output from all 47 species
Zm00001e022659_P002	Zm00001e022659	component RPS14 of SSU proteome	0.02	OrthoFinder output from all 47 species
Zm00001e030302_P001	Zm00001e030302	component RPS14 of SSU proteome	0.02	OrthoFinder output from all 47 species
Zm00001e030304_P001	Zm00001e030304	component RPS14 of SSU proteome	0.02	OrthoFinder output from all 47 species
Zm00001e037468_P002	Zm00001e037468	component RPS14 of SSU proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
CC	GO:0005681	spliceosomal complex	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001971	Ribosomal_S11	30	148

External Links

No external refs found!

Als_g07705

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation