Als_g07418 (MBD05, MBD5, ATMBD5)

Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader *(MBD5-6) & original description: none

Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g07418

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0028.g024028	ATMBD6, MBD6	methylation reader *(MBD5-6) & original description: CDS=264-1880	0.04	OrthoFinder output from all 47 species
Azfi_s0034.g025362	No alias	not classified & original description: CDS=1-987	0.03	OrthoFinder output from all 47 species
Azfi_s0158.g053875	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: CDS=259-3537	0.02	OrthoFinder output from all 47 species
Ehy_g06705	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01024953001	No alias	No description available	0.03	OrthoFinder output from all 47 species
Lfl_g04135	ATMBD6, MBD6	methylation reader *(MBD5-6) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10435096g0020	MBD13	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0239.g026595	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: CDS=121-1635	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	428	478

External Links

No external refs found!