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  5. Als_g07289

Als_g07289


Description : not classified & original description: none


Gene families : OG0001646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g07289
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Ala_g23912 XRI1, XRI not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g47369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00492 XRI1, XRI not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g05451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58363.t1 Aspi01Gene58363 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17648 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.39G003700.1 XRI1, XRI,... not classified & original description: pacid=50582772... 0.04 OrthoFinder output from all 47 species
Dac_g22087 XRI1, XRI not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g30790.1 XRI1, XRI, LOC_Os04g30790 Protein XRI1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g36380.1 LOC_Os08g36380 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g08306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59343 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Mp3g07900.1 XRI1, XRI no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g31985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02911 XRI1, XRI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009314 No alias not classified & original description: CDS=462-1397 0.03 OrthoFinder output from all 47 species
Sam_g24680 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28906 XRI1, XRI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008413_P002 XRI1, XRI, Zm00001e008413 Protein XRI1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e023784_P001 Zm00001e023784 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e040712_P004 XRI1, XRI, Zm00001e040712 Protein XRI1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!