Als_g05722


Description : component *(U11-48K) of U11 snRNP complex & original description: none


Gene families : OG0006105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g05722

Target Alias Description ECC score Gene Family Method Actions
AT3G04160 No alias unknown protein; Has 1711 Blast hits to 1353 proteins in... 0.03 OrthoFinder output from all 47 species
Aev_g24720 No alias component *(U11-48K) of U11 snRNP complex & original... 0.03 OrthoFinder output from all 47 species
Aob_g13397 No alias component *(U11-48K) of U11 snRNP complex & original... 0.02 OrthoFinder output from all 47 species
Cba_g13792 No alias component *(U11-48K) of U11 snRNP complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.12G015800.1 Ceric.12G015800 component *(U11-48K) of U11 snRNP complex & original... 0.04 OrthoFinder output from all 47 species
Dcu_g06497 No alias component *(U11-48K) of U11 snRNP complex & original... 0.03 OrthoFinder output from all 47 species
Gb_01181 No alias protein factor U11-48K of U11 small nuclear... 0.02 OrthoFinder output from all 47 species
Len_g13148 No alias component *(U11-48K) of U11 snRNP complex & original... 0.02 OrthoFinder output from all 47 species
Nbi_g10102 No alias component *(U11-48K) of U11 snRNP complex & original... 0.03 OrthoFinder output from all 47 species
Pir_g18628 No alias component *(U11-48K) of U11 snRNP complex & original... 0.03 OrthoFinder output from all 47 species
Solyc04g050760.4.1 Solyc04g050760 protein factor U11-48K of U11 small nuclear... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!