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  5. Als_g05110

Als_g05110


Description : not classified & original description: none


Gene families : OG0012411 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012411_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g05110

Target Alias Description ECC score Gene Family Method Actions
Ala_g11362 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.20G057100.1 Ceric.20G057100 not classified & original description: pacid=50566015... 0.03 OrthoFinder output from all 47 species
Dac_g10436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 139 184
IPR002885 Pentatricopeptide_repeat 239 287
IPR002885 Pentatricopeptide_repeat 340 387
IPR002885 Pentatricopeptide_repeat 440 485
IPR002885 Pentatricopeptide_repeat 746 792
IPR002885 Pentatricopeptide_repeat 645 675
IPR002885 Pentatricopeptide_repeat 820 844
IPR002885 Pentatricopeptide_repeat 545 574
IPR002885 Pentatricopeptide_repeat 617 643
No external refs found!