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  5. Als_g05092

Als_g05092 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0012792 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012792_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g05092
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
Aop_g13378 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0096.g043764 CRR22 not classified & original description: CDS=1-1557 0.03 OrthoFinder output from all 47 species
Cba_g19560 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g02357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 589 620
IPR046848 E_motif 641 684
IPR002885 Pentatricopeptide_repeat 524 567
IPR002885 Pentatricopeptide_repeat 85 131
IPR002885 Pentatricopeptide_repeat 423 460
IPR002885 Pentatricopeptide_repeat 185 232
IPR002885 Pentatricopeptide_repeat 362 387
IPR002885 Pentatricopeptide_repeat 289 315
IPR002885 Pentatricopeptide_repeat 497 520
IPR002885 Pentatricopeptide_repeat 390 420
IPR002885 Pentatricopeptide_repeat 261 287
No external refs found!