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  5. Als_g05078

Als_g05078 (ftsh3)


Aliases : ftsh3

Description : component *(Fts3/10) of FtsH3/10 matrix-AAA protease heterodimers & original description: none


Gene families : OG0002007 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002007_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g05078
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Cre01.g019850 ftsh3 Protein degradation.peptidase families.metallopeptidase... 0.02 OrthoFinder output from all 47 species
Dac_g29240 ftsh3 component *(Fts3/10) of FtsH3/10 matrix-AAA protease... 0.03 OrthoFinder output from all 47 species
Gb_01192 ftsh3 component Fts3|10 of FtsH3|10 matrix-AAA protease heterodimers 0.05 OrthoFinder output from all 47 species
MA_10433799g0010 ftsh3 ATP-dependent zinc metalloprotease FTSH 8, mitochondrial... 0.03 OrthoFinder output from all 47 species
MA_10435616g0010 ftsh10 ATP-dependent zinc metalloprotease FTSH 10,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEA Interproscan
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 388 520
IPR011546 Pept_M41_FtsH_extracell 167 276
IPR041569 AAA_lid_3 549 589
IPR000642 Peptidase_M41 604 786
No external refs found!