1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g04873

Als_g04873 (BOP2)


Aliases : BOP2

Description : not classified & original description: none


Gene families : OG0001046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g04873
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00115370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bZIP... 0.02 OrthoFinder output from all 47 species
Aev_g11585 BOP2 transcriptional co-activator *(BOP) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12706 BOP2 transcriptional co-activator *(BOP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05458 BOP2 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20218.t1 BOP2, Aspi01Gene20218 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42280.t1 BOP2, Aspi01Gene42280 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013694 BOP2 not classified & original description: CDS=1-1683 0.03 OrthoFinder output from all 47 species
Ceric.21G022600.1 BOP2, Ceric.21G022600 transcriptional co-activator *(BOP) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02819 ATNPR3, NPR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06351 BOP1 no description available(sp|a0a072vim5|noot2_medtr : 169.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g46440.1 ATNPR3, NPR3,... receptor protein (NPR3|4) 0.02 OrthoFinder output from all 47 species
LOC_Os11g04600.1 BOP2, LOC_Os11g04600 transcriptional co-activator (BOP) 0.03 OrthoFinder output from all 47 species
LOC_Os12g04410.1 BOP2, LOC_Os12g04410 transcriptional co-activator (BOP) 0.04 OrthoFinder output from all 47 species
Len_g07446 BOP2 transcriptional co-activator *(BOP) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18109 BOP2 transcriptional co-activator *(BOP) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03720 BOP2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g10052 BOP1 transcriptional co-activator *(BOP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62749 BOP2 transcriptional co-activator *(BOP) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019986 BOP1 not classified & original description: CDS=344-2182 0.06 OrthoFinder output from all 47 species
Spa_g51802 BOP2 transcriptional co-activator *(BOP) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 109 186
No external refs found!