1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g04664

Als_g04664 (UBC5)


Aliases : UBC5

Description : E2 ubiquitin-conjugating enzyme *(UBC4) & original description: none


Gene families : OG0001369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001369_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g04664

Target Alias Description ECC score Gene Family Method Actions
AT1G63800 UBC5 ubiquitin-conjugating enzyme 5 0.04 OrthoFinder output from all 47 species
Adi_g074543 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Als_g06703 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.03 OrthoFinder output from all 47 species
Ceric.04G027100.1 UBC5, Ceric.04G027100 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.05 OrthoFinder output from all 47 species
Cre01.g027200 UBC5 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Dcu_g05177 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.05 OrthoFinder output from all 47 species
LOC_Os10g31000.1 UBC5, LOC_Os10g31000 ubiquitin-conjugating E2 protein 0.04 OrthoFinder output from all 47 species
Solyc10g012240.3.1 UBC5, Solyc10g012240 ubiquitin-conjugating E2 protein 0.02 OrthoFinder output from all 47 species
Spa_g10917 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e000387_P004 UBC4, ATUBC4,... ubiquitin-conjugating E2 protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 3 127
No external refs found!