1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g04479

Als_g04479


Description : not classified & original description: none


Gene families : OG0001413 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001413_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g04479

Target Alias Description ECC score Gene Family Method Actions
Ala_g10010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G013900.1 Ceric.14G013900 not classified & original description: pacid=50634528... 0.03 OrthoFinder output from all 47 species
Ceric.20G013800.1 Ceric.20G013800 not classified & original description: pacid=50566358... 0.03 OrthoFinder output from all 47 species
Ehy_g19791 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01028908001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Lfl_g17268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_141991g0010 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_3965g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Ore_g40494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g025440.3.1 Solyc03g025440 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Tin_g11110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!