1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g04460

Als_g04460 (Phox2)


Aliases : Phox2

Description : myosin adaptor protein *(MadB) & original description: none


Gene families : OG0001349 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001349_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g04460
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00213700 Phox2,... Cytoskeleton.microfilament network.myosin... 0.04 OrthoFinder output from all 47 species
Adi_g057533 Phox2 myosin adaptor protein *(MadB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20914 Phox2 myosin adaptor protein *(MadB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13258 Phox2 myosin adaptor protein *(MadB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05076.t1 Phox2, Aspi01Gene05076 myosin adaptor protein *(MadB) & original description: none 0.03 OrthoFinder output from all 47 species
Cre10.g430501 Phox2 Cytoskeleton.microfilament network.myosin... 0.02 OrthoFinder output from all 47 species
Nbi_g18711 Phox2 myosin adaptor protein *(MadB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g45361 Phox2 myosin adaptor protein *(MadB) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006804 Phox2 myosin adaptor protein *(MadB) & original description: CDS=1-2523 0.05 OrthoFinder output from all 47 species
Tin_g11600 Phox2 myosin adaptor protein *(MadB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 350 418
No external refs found!