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  5. Als_g04212

Als_g04212


Description : regulatory protein *(ELMO) involved in pectin-dependent cell adhesion & original description: none


Gene families : OG0000860 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000860_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g04212
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT2G32580 No alias Protein of unknown function (DUF1068) 0.02 OrthoFinder output from all 47 species
Aev_g03777 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Aev_g41398 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.06 OrthoFinder output from all 47 species
Aob_g13051 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Aop_g00123 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Azfi_s2440.g111376 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Ceric.13G017800.1 Ceric.13G017800 regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Dcu_g39066 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Dcu_g39399 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Dde_g01231 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
GSVIVT01030473001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os03g56610.1 LOC_Os03g56610 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g42340.1 LOC_Os04g42340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g02658 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.05 OrthoFinder output from all 47 species
Len_g15144 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Len_g17259 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Len_g28995 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.06 OrthoFinder output from all 47 species
Lfl_g35834 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.06 OrthoFinder output from all 47 species
MA_881995g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9349488g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g00897 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Msp_g01402 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Nbi_g04648 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.05 OrthoFinder output from all 47 species
Nbi_g12392 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Nbi_g23616 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Pir_g09967 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Ppi_g00468 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Sam_g15755 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Smo141704 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc07g049730.3.1 Solyc07g049730 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g08636 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Spa_g15346 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Spa_g17481 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Tin_g04904 No alias regulatory protein *(ELMO) involved in pecTin-dependent... 0.03 OrthoFinder output from all 47 species
Zm00001e041170_P001 Zm00001e041170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR010471 DUF1068 24 167
No external refs found!