Als_g02986


Description : not classified & original description: none


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g02986

Target Alias Description ECC score Gene Family Method Actions
Adi_g019345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24124 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g25729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g65712 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.08G003300.1 Ceric.08G003300 not classified & original description: pacid=50638706... 0.04 OrthoFinder output from all 47 species
Ceric.09G067900.1 Ceric.09G067900 not classified & original description: pacid=50588290... 0.04 OrthoFinder output from all 47 species
Ceric.12G065400.1 Ceric.12G065400 not classified & original description: pacid=50601520... 0.06 OrthoFinder output from all 47 species
Ceric.1Z218900.1 Ceric.1Z218900 not classified & original description: pacid=50637330... 0.05 OrthoFinder output from all 47 species
Dac_g16960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03003 MEF20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0295.g027183 No alias not classified & original description: CDS=1-1983 0.05 OrthoFinder output from all 47 species
Sam_g07976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15426 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g01169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 288 337
IPR002885 Pentatricopeptide_repeat 190 210
No external refs found!