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  5. Als_g02406

Als_g02406


Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g02406

Target Alias Description ECC score Gene Family Method Actions
Aob_g11848 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14354 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05022.t1 Aspi01Gene05022 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0049.g030896 No alias TCP-type transcription factor & original description: CDS=1-1743 0.03 OrthoFinder output from all 47 species
Azfi_s1759.g106502 No alias TCP-type transcription factor & original description: CDS=1-315 0.05 OrthoFinder output from all 47 species
Dde_g05364 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07713 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g38455 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13049 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 84 265
No external refs found!