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Description : not classified & original description: none
Gene families : OG0005967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005967_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Als_g01078 | |
| Cluster | HCCA: Cluster_213 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00020910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g30825,... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g01555 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g04893 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g07385 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g21865 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene09212.t1 | Aspi01Gene09212 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g12627 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G065200.1 | Ceric.19G065200 | not classified & original description: pacid=50576378... | 0.11 | OrthoFinder output from all 47 species | |
| Ehy_g05044 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_06104 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g25550.1 | LOC_Os09g25550 | Pentatricopeptide repeat-containing protein At4g30825,... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g20786 | No alias | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Lfl_g06728 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g07710.1 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g36090 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g09709 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0149.g023267 | No alias | not classified & original description: CDS=111-2933 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13761 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23344 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e040095_P002 | Zm00001e040095 | Pentatricopeptide repeat-containing protein At4g30825,... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | HCCA |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0098809 | nitrite reductase activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 556 | 581 |
| IPR002885 | Pentatricopeptide_repeat | 590 | 617 |
| IPR002885 | Pentatricopeptide_repeat | 522 | 548 |
| IPR002885 | Pentatricopeptide_repeat | 412 | 437 |
| IPR002885 | Pentatricopeptide_repeat | 171 | 201 |
| IPR002885 | Pentatricopeptide_repeat | 284 | 308 |
| IPR002885 | Pentatricopeptide_repeat | 110 | 146 |
| IPR002885 | Pentatricopeptide_repeat | 647 | 705 |
| IPR002885 | Pentatricopeptide_repeat | 726 | 773 |
| No external refs found! |