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  5. Als_g00481

Als_g00481


Description : adaptor component *(ClpS) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0005952 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005952_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g00481

Target Alias Description ECC score Gene Family Method Actions
AT1G68660 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.03 OrthoFinder output from all 47 species
Ala_g00971 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Aob_g02628 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Cba_g00591 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.124 No alias Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder output from all 47 species
Dcu_g03444 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Dde_g01293 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Ehy_g03330 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01008253001 No alias Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
LOC_Os08g33540.1 LOC_Os08g33540 adaptor component ClpS of chloroplast Clp-type protease complex 0.03 OrthoFinder output from all 47 species
Nbi_g00525 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Zm00001e004147_P001 Zm00001e004147 adaptor component ClpS of chloroplast Clp-type protease complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030163 protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003769 ClpS_core 89 155
No external refs found!