Als_g00378

Description : protein involved in PS-I assembly *(PPD1) & original description: none

Gene families : OG0006534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006534_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g00378
Cluster	HCCA: Cluster_225

Target	Alias	Description	ECC score	Gene Family Method
AT4G15510	No alias	Photosystem II reaction center PsbP family protein	0.08	OrthoFinder output from all 47 species
Ceric.27G030500.1	Ceric.27G030500	protein involved in PS-I assembly *(PPD1) & original...	0.06	OrthoFinder output from all 47 species
Cre08.g362900	No alias	Photosynthesis.photophosphorylation.photosystem...	0.03	OrthoFinder output from all 47 species
Gb_02226	No alias	PPD1 protein involved in PS-I assembly	0.03	OrthoFinder output from all 47 species
LOC_Os12g37710.1	LOC_Os12g37710	PPD1 protein involved in PS-I assembly	0.06	OrthoFinder output from all 47 species
MA_81231g0010	No alias	PPD1 protein involved in PS-I assembly	0.07	OrthoFinder output from all 47 species
Ppi_g08071	No alias	protein involved in PS-I assembly *(PPD1) & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001177	No alias	protein involved in PS-I assembly *(PPD1) & original...	0.04	OrthoFinder output from all 47 species
Solyc01g106090.3.1	Solyc01g106090	PPD1 protein involved in PS-I assembly	0.04	OrthoFinder output from all 47 species
Spa_g12584	No alias	protein involved in PS-I assembly *(PPD1) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
CC	GO:0019898	extrinsic component of membrane	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002683	PsbP_C	87	263

External Links

No external refs found!