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  5. Als_g00265

Als_g00265 (PBC1)


Aliases : PBC1

Description : beta-type-3 component *(PBC) of 26S proteasome & original description: none


Gene families : OG0004036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g00265

Target Alias Description ECC score Gene Family Method Actions
AT1G21720 PBC1 proteasome beta subunit C1 0.02 OrthoFinder output from all 47 species
Adi_g018669 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aob_g01174 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aop_g00275 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cre06.g267500 PBC1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Dcu_g35364 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Gb_29749 PBC1 component beta type-3 of 26S proteasome 0.03 OrthoFinder output from all 47 species
LOC_Os06g43570.1 PBC1, LOC_Os06g43570 component beta type-3 of 26S proteasome 0.02 OrthoFinder output from all 47 species
MA_70161g0010 PBC1 component beta type-3 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Mp7g15370.1 PBC1 component beta type-3 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Msp_g01419 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo266913 PBC1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Solyc04g009410.3.1 PBC1, Solyc04g009410 component beta type-3 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Zm00001e013846_P001 PBC1, Zm00001e013846 component beta type-3 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Zm00001e037487_P001 PBC1, Zm00001e037487 component beta type-3 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 7 188
No external refs found!