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  5. Pnu_g09540

Pnu_g09540 (PIRL1)


Aliases : PIRL1

Description : not classified & original description: none


Gene families : OG0004725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g09540

Target Alias Description ECC score Gene Family Method Actions
Ala_g13607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20586 PIRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30235 PIRL3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 189 231
IPR001611 Leu-rich_rpt 266 324
IPR001611 Leu-rich_rpt 347 395
No external refs found!