Pnu_g09391

Description : 16S-rRNA maturation factor *(RBF1) & original description: none

Gene families : OG0006622 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006622_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g09391

Target	Alias	Description	ECC score	Gene Family Method
Cba_g10039	No alias	16S-rRNA maturation factor *(RBF1) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g22214	No alias	16S-rRNA maturation factor *(RBF1) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g07524	No alias	16S-rRNA maturation factor *(RBF1) & original description: none	0.04	OrthoFinder output from all 47 species
Mp1g03290.1	No alias	Probable ribosome-binding factor A, chloroplastic...	0.03	OrthoFinder output from all 47 species
Nbi_g07187	No alias	16S-rRNA maturation factor *(RBF1) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g15385	No alias	16S-rRNA maturation factor *(RBF1) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g110550.3.1	Solyc01g110550	Probable ribosome-binding factor A, chloroplastic...	0.03	OrthoFinder output from all 47 species
Zm00001e036560_P001	Zm00001e036560	Probable ribosome-binding factor A, chloroplastic...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000238	RbfA	110	227

External Links

No external refs found!