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Pnu_g09055 (APUM4, PUM4)


Aliases : APUM4, PUM4

Description : not classified & original description: none


Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g09055
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Aev_g07329 APUM2, PUM2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G068300.1 APUM2, PUM2,... not classified & original description: pacid=50621207... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001065.15 PUM5, APUM5 No description available 0.01 OrthoFinder output from all 47 species
Dde_g02392 PUM1, APUM1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05952 PUM3, APUM3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10215 APUM4, PUM4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g076340.3.1 APUM2, PUM2,... Pumilio homolog 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e003598_P001 PUM5, APUM5,... Pumilio homolog 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e029661_P001 APUM2, PUM2,... Pumilio homolog 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 702 736
IPR001313 Pumilio_RNA-bd_rpt 817 841
IPR001313 Pumilio_RNA-bd_rpt 884 915
IPR001313 Pumilio_RNA-bd_rpt 846 881
IPR001313 Pumilio_RNA-bd_rpt 738 767
IPR001313 Pumilio_RNA-bd_rpt 919 953
IPR001313 Pumilio_RNA-bd_rpt 774 807
IPR001313 Pumilio_RNA-bd_rpt 965 994
IPR012940 NABP 340 606
IPR012940 NABP 613 696
No external refs found!