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  5. Pnu_g08972

Pnu_g08972 (emb1138)


Aliases : emb1138

Description : group-II intron splicing RNA helicase *(PMH) & original description: none


Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g08972

Target Alias Description ECC score Gene Family Method Actions
Aev_g09590 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g01008 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP HCCA
MF GO:0004000 adenosine deaminase activity IEP HCCA
BP GO:0006382 adenosine to inosine editing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016553 base conversion or substitution editing IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR012562 GUCT 588 686
IPR001650 Helicase_C 393 501
IPR011545 DEAD/DEAH_box_helicase_dom 182 356
No external refs found!