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  5. Pnu_g08074

Pnu_g08074


Description : not classified & original description: none


Gene families : OG0002335 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g08074

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00211030 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Als_g55088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g121450.3.1 Solyc03g121450 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g23008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 33 96
IPR000504 RRM_dom 208 269
No external refs found!