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  5. Pnu_g07582

Pnu_g07582 (ATDCL2, DCL2)


Aliases : ATDCL2, DCL2

Description : endoribonuclease (DCL2) of transacting siRNA pathway & original description: none


Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g07582

Target Alias Description ECC score Gene Family Method Actions
MA_10436812g0020 DCL4, ATDCL4 Dicer-like protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR003100 PAZ_dom 856 986
IPR001650 Helicase_C 387 494
IPR000999 RNase_III_dom 1236 1348
IPR000999 RNase_III_dom 1029 1159
IPR011545 DEAD/DEAH_box_helicase_dom 31 165
No external refs found!