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  5. Pnu_g07545

Pnu_g07545


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g07545
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Ceric.38G044200.1 Ceric.38G044200 Trihelix-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.38G051400.1 Ceric.38G051400 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Gb_19309 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
LOC_Os01g52090.1 LOC_Os01g52090 transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
MA_4997g0010 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 113 203
No external refs found!