Pnu_g07521 (GCT)

Aliases : GCT

Description : component *(MED13) of kinase module of MEDIATOR transcription co-activator complex & original description: none

Gene families : OG0005581 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005581_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g07521

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00198p00028070	GCT,...	RNA biosynthesis.RNA polymerase II-dependent...	0.02	OrthoFinder output from all 47 species
Aop_g09012	GCT	component *(MED13) of kinase module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Dac_g12549	GCT	component *(MED13) of kinase module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Ehy_g17091	GCT	component *(MED13) of kinase module of MEDIATOR...	0.02	OrthoFinder output from all 47 species
LOC_Os05g37500.1	GCT, LOC_Os05g37500	component MED13 of kinase module of MEDIATOR...	0.02	OrthoFinder output from all 47 species
Lfl_g29089	GCT	component *(MED13) of kinase module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Pir_g18257	GCT	component *(MED13) of kinase module of MEDIATOR...	0.02	OrthoFinder output from all 47 species
Sam_g29276	No alias	component *(MED13) of kinase module of MEDIATOR...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003712	transcription coregulator activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0016592	mediator complex	IEA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR009401	Med13_C	1651	2045
IPR021643	Mediator_Med13_N	7	248
IPR041285	MID_MedPIWI	1371	1494
IPR041285	MID_MedPIWI	1259	1367

External Links

No external refs found!

Pnu_g07521 (GCT)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation