1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g07486

Pnu_g07486 (SPT16)


Aliases : SPT16

Description : component *(SPT16) of FACT histone chaperone complex & original description: none


Gene families : OG0002057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002057_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g07486

Target Alias Description ECC score Gene Family Method Actions
Adi_g049276 SPT16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os12g26030.1 SPT16, LOC_Os12g26030 component SPT16 of FACT histone chaperone complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR013953 FACT_Spt16 552 703
IPR029148 FACT-Spt16_Nlobe 21 184
IPR000994 Pept_M24 199 432
IPR013719 RTT106/SPT16-like_middle_dom 830 916
No external refs found!