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  5. Pnu_g07436

Pnu_g07436


Description : E4 polyubiquitination factor *(UAP) & original description: none


Gene families : OG0001079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g07436

Target Alias Description ECC score Gene Family Method Actions
AT4G28300 No alias Protein of unknown function (DUF1421) 0.03 OrthoFinder output from all 47 species
Adi_g020701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05434 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11772 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19334 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR010820 DUF1421 510 553
No external refs found!