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  5. Pnu_g07334

Pnu_g07334


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0002976 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002976_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g07334
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00265300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
Aob_g42828 No alias plastidial UMP kinase *(PUMPKIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G071800.1 Ceric.15G071800 plastidial UMP kinase *(PUMPKIN) & original description:... 0.03 OrthoFinder output from all 47 species
Len_g24672 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39446 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51044 No alias plastidial UMP kinase *(PUMPKIN) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12734 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 164 256
IPR001048 Asp/Glu/Uridylate_kinase 313 522
No external refs found!