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  5. Pnu_g06607

Pnu_g06607 (YLMG2, ATYLMG2)


Aliases : YLMG2, ATYLMG2

Description : not classified & original description: none


Gene families : OG0002185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g06607
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00200150 YLMG1-2,... YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00238310 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g046778 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08970 YLMG2, ATYLMG2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04100 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07670 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02771 YLMG2, ATYLMG2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G081600.1 emb1990,... plastid-nucleoid partitioning factor *(YLMG1) & original... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020510.71 YLMG2, ATYLMG2 No description available 0.01 OrthoFinder output from all 47 species
Cre12.g557050 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g14338 YLMG1-2, ATYLMG1-2 plastid-nucleoid partitioning factor *(YLMG1) & original... 0.02 OrthoFinder output from all 47 species
Dac_g31838 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10748 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02100 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05180 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05213 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_961483g0010 emb1990,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g13060.1 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp8g11810.1 YLMG1-2, ATYLMG1-2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g10281 YLMG2, ATYLMG2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g12666 YLMG1-2, ATYLMG1-2 plastid-nucleoid partitioning factor *(YLMG1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g18597 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18598 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18599 YLMG2, ATYLMG2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c10_6170V3.1 YLMG1-2,... YGGT family protein 0.01 OrthoFinder output from all 47 species
Ppi_g31514 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g58200 YLMG1-2, ATYLMG1-2 plastid-nucleoid partitioning factor *(YLMG1) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016203 YLMG2, ATYLMG2 not classified & original description: CDS=1-753 0.03 OrthoFinder output from all 47 species
Sam_g06521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo438165 YLMG1-2, ATYLMG1-2 YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc08g061630.3.1 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Tin_g00523 YLMG2, ATYLMG2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e000570_P001 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e038876_P002 Zm00001e038876 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003425 CCB3/YggT 124 188
No external refs found!