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  5. Pnu_g06475

Pnu_g06475 (ATH15, ATATH15)


Aliases : ATH15, ATATH15

Description : not classified & original description: none


Gene families : OG0001787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001787_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g06475
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Ala_g07489 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016230 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: CDS=354-3422 0.02 OrthoFinder output from all 47 species
Gb_37633 ATH1, ATATH1, ABCA2 fatty acid transporter (ABCA). subfamily ABCA transporter 0.05 OrthoFinder output from all 47 species
Mp7g18500.1 ATH1, ATATH1, ABCA2 fatty acid transporter (ABCA). subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
Msp_g36286 ATH15, ATATH15 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19384 ATH1, ATATH1, ABCA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06474 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g113070.4.1 ATH1, ATATH1,... fatty acid transporter (ABCA). subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA

No InterPro domains available for this sequence

No external refs found!